DeepPhe software

Downloads

Choose the DeepPhe product that fits your work.
Installers (recommended) for full DeepPhe software suites are listed first; individual tools and source code bundles remain available below.

Research and translational studies

DeepPhe Translational

For translational studies, research cohorts, and visual review of extracted cancer phenotypes.

The Installers will download and set up everything required to run the default DeepPhe Translational workflow, from NLP Summarization to Visualization.

Release documentation

Recommended

Installers

Choose your operating system to install the complete research software tool collection.

Version 7.1 Updated Jul 13, 2026

Windows installer DeepPhe_windows-7.1.exe macOS installer DeepPhe-7.1.dmg Linux installer DeepPhe_linux-x64-7.1.sh
Individual tools, examples, and source code Open this section when you need individual components, sample data, or source code instead of the standard installation.

Example Cohort

Sample files for trying the DeepPhe Translational workflow, including clinical notes and an OMOP database for fake patients.

Version 7.1 Updated Jul 8, 2026

Example cohort package DeepPhe-examples.zip

DeepPhe Translational source code

Source code bundle for the DeepPhe Translational release.

Version xn0.7.1 Updated Jul 22, 2026

ZIP package xn0.7.1.zip tar.gz package xn0.7.1.tar.gz

DeepPhe Visualizer Database Creator

Tool to load DeepPhe results and OMOP tables into the database used by the Data API and Visualizer.

Version 7.1 Updated Jul 8, 2026

Windows DeepPheVizDbCreator-windows-x86_64.exe macOS (Intel) DeepPheVizDbCreator-macos-x86_64 macOS (Apple silicon) DeepPheVizDbCreator-macos-arm64 Linux DeepPheVizDbCreator-linux-x86_64

DeepPhe Database Service

Serve database content from the DeepPhe Visualizer Database Creator to the DeepPhe Visualizer and other applications.

Version 7.1 Updated Jul 8, 2026

Windows dphe-data-api-win-x64.exe macOS (Intel) dphe-data-api-macos-x64 macOS (Apple silicon) dphe-data-api-macos-arm64 Linux dphe-data-api-linux-x64

DeepPhe Visualizer source code

Source code bundle for the DeepPhe Visualizer.

Version 7.1 Updated Jul 14, 2026

ZIP package v0.7.1.zip tar.gz package v0.7.1.tar.gz