Guides and references
Documentation
Start with installation, then use these guides to run DeepPhe, load and access its data, and explore the results.
DeepPhe documentation guides
01 · Start here
DeepPhe Installation Guide
Download the installer and get started with DeepPhe Translational and DeepPhe Visualizer.
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02 · Run
DeepPhe Desktop GUI Guide
Run DeepPhe and manage processing from the desktop application.
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03 · Store
DeepPhe DB Pipeline
Load DeepPhe output into the database used by DeepPhe Data API and DeepPhe Visualizer.
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04 · Access
DeepPhe Data API
Query DeepPhe data programmatically and connect it to downstream applications.
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05 · Explore
DeepPhe Visualizer 2 User Guide
Install and use version 2 of the web application to explore cohorts and individual patient records.
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NLP Configuration
DeepPhe Patient Summarizer Wiki
Information on the NLP Patient Summarizer, input, output and processing.
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